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Simulate sequence data and complicated pedigree structures

Ensemble Samplers for Julia

Neuroimaging in Julia

Neuroimaging in Julia

Simulation, visualization, and inference of individual level infectious disease models with Julia

Everything you've never dreamed about measuring on ecological networks.

Everything you've never dreamed about measuring on ecological networks.

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

Julia framework for spatial ecology - data types and utilities

DCE MRI analysis in Julia

Progressive alignment scripts for protein sequences

Neural Signal Analysis

A data structure for efficient manipulation of sets of intervals

A modern genomics framework for julia

Parse and process FASTA and FASTQ formatted files of biological sequences.

Datastructures and algorithms for working with genetic variation

✂️ Pooled CRISPR screen optimization tool

A Julia package to efficiently fold all local and long-range RNA duplexes.

A Julia package to read and write MMTF files

Stochastic Gillespie-type simulations using Julia

Choo-choo

🧬High-performance genetics- and genomics-related data visualization using Makie.jl

Receiver Operating Characteristic (ROC) Curve for Julia Language

Inference of microbial interaction networks from large-scale heterogeneous abundance data

Easily embed annotations in your microscopy images

High-level, high-performance, constraint-based reconstruction and analysis in Julia

Julia package for diversity measurement

Sequence alignment tools

A unified framework for skeletonization, morphological analysis, and connectivity analysis.

A lightweight and powerful Julia package for computational pipelines and workflows.

Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:

A Julia package to read, write and manipulate macromolecular structures

Plotting and interface tools for biology.

CellMLToolkit.jl is a Julia library that connects CellML models to the Scientific Julia ecosystem.

Compressed storage for SNP data

Utilities to read/write FASTA format files in Julia

A Julia package to analyze protein sequences, structures, and evolutionary information

Algorithms from circuit theory to predict connectivity in heterogeneous landscapes