This package is used to benchmark and interactively explore the results of metagenomic binning given a dataset. This is the Julia backend of the command-line tool BinBencher [work in progress].
- Install Julia (ideally using Juliaup: https://github.com/JuliaLang/juliaup) or from the official website
www.julialang.org - Use the Julia package manager to install this package:
] add BinBencherBackend
Basic usage:
using BinBencherBackend
ref = Reference("files/ref.json")
bins = Binning("files/clusters.tsv", ref)
print_matrix(bins)For more, see the documentation