LatticeDiracOperators.jl

Dirac operators for lattice QCD with Julia
Author akio-tomiya
Github
Popularity
4 Stars
Updated Last
4 Months Ago
Started In
January 2022

LatticeDiracOperators

Dev CI

Abstract

This is a package for lattice QCD codes. Treating pseudo-femrion fields with various lattice Dirac operators, fermion actions with MPI.

This package is used in LatticeQCD.jl and a code in a project JuliaQCD.

What this package can do:

  • Constructing actions and its derivative for Staggered Fermion with 1-8 tastes (with the use of the rational HMC technique)
  • Constructing actions and its derivative for Wilson Fermion
  • (EXPERIMENTAL) Constructing actions and its derivative for Standard Domainwall Fermion
  • Hybrid Monte Carlo method with fermions.

With the use of the Gaugefields.jl, we can also do the HMC with STOUT smearing.

This package will be used in LatticeQCD.jl. This package uses Gaugefields.jl. This package can be regarded as the additional package of the Gaugefields.jl to treat with Lattice fermions (pseudo- fermions).

Install

In the package mode, Julia REPL,

add LatticeDiracOperators

How to use

Definition of the pseudo-fermion fields

The pseudo-fermin field is defined as

using Gaugefields
using LatticeDiracOperators

NX = 4
NY = 4
NZ = 4
NT = 4
Nwing = 1
Dim = 4
NC = 3

U = Initialize_4DGaugefields(NC,Nwing,NX,NY,NZ,NT,condition = "cold")
x = Initialize_pseudofermion_fields(U[1],"Wilson")

Now, x is a pseudo fermion fields for Wilson Dirac operator. The element of x is x[ic,ix,iy,iz,it,ialpha]. ic is an index of the color. ialpha is the internal degree of the gamma matrix.

Then, the Wilson Dirac operator can be defined as

params = Dict()
params["Dirac_operator"] = "Wilson"
params["κ"] = 0.141139
params["eps_CG"] = 1.0e-8
params["verbose_level"] = 2

D = Dirac_operator(U,x,params)

If you want to get the Gaussian distributed pseudo-fermions, just do

gauss_distribution_fermion!(x)

Then, you can apply the Dirac operator to the pseudo-fermion fields.

using LinearAlgebra
y = similar(x)
mul!(y,D,x)

And you can solve the equation $D x = b$ like

solve_DinvX!(y,D,x)
println(y[1,1,1,1,1,1])

If you want to see the convergence of the CG method, you can change the "verbose_level" in the Dirac operator.

params["verbose_level"] = 3
D = Dirac_operator(U,x,params)
gauss_distribution_fermion!(x)
solve_DinvX!(y,D,x)
println(y[1,1,1,1,1,1])

The output is like

bicg method
1-th eps: 1742.5253056262081
2-th eps: 758.2899742222573
3-th eps: 378.7020470573924
4-th eps: 210.17029515182503
5-th eps: 118.00493128655506
6-th eps: 63.31719669150997
7-th eps: 36.18603541453448
8-th eps: 21.593691953496077
9-th eps: 16.02895509383768
10-th eps: 12.920647360667004
11-th eps: 9.532250164198402
12-th eps: 5.708202470516758
13-th eps: 3.1711913019834337
14-th eps: 0.9672090407947617
15-th eps: 0.14579004932559966
16-th eps: 0.02467506197970277
17-th eps: 0.005588563782732157
18-th eps: 0.002285284357387675
19-th eps: 5.147142014626153e-5
20-th eps: 3.5632092739322066e-10
Converged at 20-th step. eps: 3.5632092739322066e-10

Other operators

You can use the adjoint of the Dirac operator

gauss_distribution_fermion!(x)
solve_DinvX!(y,D',x)
println(y[1,1,1,1,1,1])

You can define the D^{\dagger} D operator.

DdagD = DdagD_operator(U,x,params)
gauss_distribution_fermion!(x)
solve_DinvX!(y,DdagD,x) 
println(y[1,1,1,1,1,1])

Staggared Fermions

The Dirac operator of the staggered fermions is defined as

x = Initialize_pseudofermion_fields(U[1],"staggered")
gauss_distribution_fermion!(x)
params = Dict()
params["Dirac_operator"] = "staggered"
params["mass"] = 0.1
params["eps_CG"] = 1.0e-8
params["verbose_level"] = 2
D = Dirac_operator(U,x,params)

y = similar(x)
mul!(y,D,x)
println(y[1,1,1,1,1,1])

solve_DinvX!(y,D,x)
println(y[1,1,1,1,1,1])

The "tastes" of the Staggered Fermion is defined in the action.

(EXPERIMENTAL) Domainwall Fermions

This package supports standard domainwall fermions. The Dirac operator of the domainwall fermion is defined as

L5 = 4
x = Initialize_pseudofermion_fields(U[1],"Domainwall",L5=L5)
println("x ", x.w[1][1,1,1,1,1,1])
gauss_distribution_fermion!(x)

params = Dict()
params["Dirac_operator"] = "Domainwall"
params["eps_CG"] = 1.0e-16
params["MaxCGstep"] = 3000
params["verbose_level"] = 3
params["mass"] = 0.1
params["L5"] = L5
D = Dirac_operator(U,x,params)

println("x ", x[1,1,1,1,1,1,1])
y = similar(x)
solve_DinvX!(y,D,x)
println("y ", y[1,1,1,1,1,1,1])

z = similar(x)
mul!(z,D,y)
println("z ", z[1,1,1,1,1,1,1])

The domainwall fermion is defined in 5D space. The element of x is x[ic,ix,iy,iz,it,ialpha,iL], where iL is an index on the five dimensional axis.

Fermion Action

Wilson Fermion

The action for pseudo-fermion is defined as

NX = 4
NY = 4
NZ = 4
NT = 4
Nwing = 1
Dim = 4
NC = 3

U = Initialize_4DGaugefields(NC,Nwing,NX,NY,NZ,NT,condition = "cold")
x = Initialize_pseudofermion_fields(U[1],"Wilson")
gauss_distribution_fermion!(x)

params = Dict()
params["Dirac_operator"] = "Wilson"
params["κ"] = 0.141139
params["eps_CG"] = 1.0e-8
params["verbose_level"] = 2

D = Dirac_operator(U,x,params)

parameters_action = Dict()
fermi_action = FermiAction(D,parameters_action)

The fermion action with given pseudo-fermion fields is evaluated as

Sfnew = evaluate_FermiAction(fermi_action,U,x)
println(Sfnew)

The derivative of the fermion action dSf/dU can be calculated as

UdSfdUμ = calc_UdSfdU(fermi_action,U,x)

The function calc_UdSfdU calculates the U dSf/dU, You can also use calc_UdSfdU!(UdSfdUμ,fermi_action,U,x)

Staggered Fermion

In the case of the Staggered fermion, we can choose "taste". The action is defined as

x = Initialize_pseudofermion_fields(U[1],"staggered")
gauss_distribution_fermion!(x)
params = Dict()
params["Dirac_operator"] = "staggered"
params["mass"] = 0.1
params["eps_CG"] = 1.0e-8
params["verbose_level"] = 2
D = Dirac_operator(U,x,params)

Nf = 2

println("Nf = $Nf")
parameters_action = Dict()
parameters_action["Nf"] = Nf
fermi_action = FermiAction(D,parameters_action)

Sfnew = evaluate_FermiAction(fermi_action,U,x)
println(Sfnew)

UdSfdUμ = calc_UdSfdU(fermi_action,U,x)

This package uses the RHMC techniques.

(EXPERIMENTAL) Domainwall Fermions

In the case of the domainwall fermion, the action is defined as

 L5 = 4
x = Initialize_pseudofermion_fields(U[1],"Domainwall",L5 = L5)
gauss_distribution_fermion!(x)

params = Dict()
params["Dirac_operator"] = "Domainwall"
params["mass"] = 0.1
params["L5"] = L5
params["eps_CG"] = 1.0e-19
params["verbose_level"] = 2
params["method_CG"] = "bicg"
D = Dirac_operator(U,x,params)

parameters_action = Dict()
fermi_action = FermiAction(D,parameters_action)

Sfnew = evaluate_FermiAction(fermi_action,U,x)
println(Sfnew)

UdSfdUμ = calc_UdSfdU(fermi_action,U,x)

Hybrid Monte Carlo with fermions

Wilson Fermion

We show the HMC code with this package.

using Gaugefields
using LatticeDiracOperators
using LinearAlgebra
using InteractiveUtils
using Random

function MDtest!(gauge_action,U,Dim,fermi_action,η,ξ)
    p = initialize_TA_Gaugefields(U) #This is a traceless-antihermitian gauge fields. This has NC^2-1 real coefficients. 
    Uold = similar(U)
    substitute_U!(Uold,U)
    MDsteps = 10
    temp1 = similar(U[1])
    temp2 = similar(U[1])
    comb = 6
    factor = 1/(comb*U[1].NV*U[1].NC)
    numaccepted = 0
    Random.seed!(123)

    numtrj = 10
    for itrj = 1:numtrj
        @time accepted = MDstep!(gauge_action,U,p,MDsteps,Dim,Uold,fermi_action,η,ξ)
        numaccepted += ifelse(accepted,1,0)

        plaq_t = calculate_Plaquette(U,temp1,temp2)*factor
        println("$itrj plaq_t = $plaq_t")
        println("acceptance ratio ",numaccepted/itrj)
    end
end

function calc_action(gauge_action,U,p)
    NC = U[1].NC
    Sg = -evaluate_GaugeAction(gauge_action,U)/NC #evaluate_GaugeAction(gauge_action,U) = tr(evaluate_GaugeAction_untraced(gauge_action,U))
    Sp = p*p/2
    S = Sp + Sg
    return real(S)
end


function MDstep!(gauge_action,U,p,MDsteps,Dim,Uold,fermi_action,η,ξ)
    Δτ = 1/MDsteps
    NC,_,NN... = size(U[1])
    
    gauss_distribution!(p)
    
    substitute_U!(Uold,U)
    gauss_sampling_in_action!(ξ,U,fermi_action)
    sample_pseudofermions!(η,U,fermi_action,ξ)
    Sfold = real(dot(ξ,ξ))
    println("Sfold = $Sfold")

    Sold = calc_action(gauge_action,U,p) + Sfold
    println("Sold = ",Sold)

    for itrj=1:MDsteps
        U_update!(U,p,0.5,Δτ,Dim,gauge_action)

        P_update!(U,p,1.0,Δτ,Dim,gauge_action)
        P_update_fermion!(U,p,1.0,Δτ,Dim,gauge_action,fermi_action,η)

        U_update!(U,p,0.5,Δτ,Dim,gauge_action)
    end
    Sfnew = evaluate_FermiAction(fermi_action,U,η)
    println("Sfnew = $Sfnew")
    Snew = calc_action(gauge_action,U,p) + Sfnew
    
    println("Sold = $Sold, Snew = $Snew")
    println("Snew - Sold = $(Snew-Sold)")

    accept = exp(Sold - Snew) >= rand()

    #ratio = min(1,exp(Snew-Sold))
    if accept != true #rand() > ratio
        substitute_U!(U,Uold)
        return false
    else
        return true
    end
end

function U_update!(U,p,ϵ,Δτ,Dim,gauge_action)
    temps = get_temporary_gaugefields(gauge_action)
    temp1 = temps[1]
    temp2 = temps[2]
    expU = temps[3]
    W = temps[4]

    for μ=1:Dim
        exptU!(expU,ϵ*Δτ,p[μ],[temp1,temp2])
        mul!(W,expU,U[μ])
        substitute_U!(U[μ],W)
        
    end
end

function P_update!(U,p,ϵ,Δτ,Dim,gauge_action) # p -> p +factor*U*dSdUμ
    NC = U[1].NC
    temps = get_temporary_gaugefields(gauge_action)
    dSdUμ = temps[end]
    factor =  -ϵ*Δτ/(NC)

    for μ=1:Dim
        calc_dSdUμ!(dSdUμ,gauge_action,μ,U)
        mul!(temps[1],U[μ],dSdUμ) # U*dSdUμ
        Traceless_antihermitian_add!(p[μ],factor,temps[1])
    end
end

function P_update_fermion!(U,p,ϵ,Δτ,Dim,gauge_action,fermi_action,η)  # p -> p +factor*U*dSdUμ
    #NC = U[1].NC
    temps = get_temporary_gaugefields(gauge_action)
    UdSfdUμ = temps[1:Dim]
    factor =  -ϵ*Δτ

    calc_UdSfdU!(UdSfdUμ,fermi_action,U,η)

    for μ=1:Dim
        Traceless_antihermitian_add!(p[μ],factor,UdSfdUμ[μ])
        #println(" p[μ] = ", p[μ][1,1,1,1,1])
    end
end

function test1()
    NX = 4
    NY = 4
    NZ = 4
    NT = 4
    Nwing = 1
    Dim = 4
    NC = 3

    U = Initialize_4DGaugefields(NC,Nwing,NX,NY,NZ,NT,condition = "cold")

    gauge_action = GaugeAction(U)
    plaqloop = make_loops_fromname("plaquette")
    append!(plaqloop,plaqloop')
    β = 5.5/2
    push!(gauge_action,β,plaqloop)
    
    show(gauge_action)

    x = Initialize_pseudofermion_fields(U[1],"Wilson")


    params = Dict()
    params["Dirac_operator"] = "Wilson"
    params["κ"] = 0.141139
    params["eps_CG"] = 1.0e-8
    params["verbose_level"] = 2
    D = Dirac_operator(U,x,params)


    parameters_action = Dict()
    fermi_action = FermiAction(D,parameters_action)

    y = similar(x)

    
    MDtest!(gauge_action,U,Dim,fermi_action,x,y)

end


test1()

Staggered Fermion

if you want to use the Staggered fermions in HMC, the code is like:

function test2()
    NX = 4
    NY = 4
    NZ = 4
    NT = 4
    Nwing = 1
    Dim = 4
    NC = 3

    U = Initialize_4DGaugefields(NC,Nwing,NX,NY,NZ,NT,condition = "cold")

    gauge_action = GaugeAction(U)
    plaqloop = make_loops_fromname("plaquette")
    append!(plaqloop,plaqloop')
    β = 5.5/2
    push!(gauge_action,β,plaqloop)
    
    show(gauge_action)

    x = Initialize_pseudofermion_fields(U[1],"staggered")
    gauss_distribution_fermion!(x)
    params = Dict()
    params["Dirac_operator"] = "staggered"
    params["mass"] = 0.1
    params["eps_CG"] = 1.0e-8
    params["verbose_level"] = 2
    D = Dirac_operator(U,x,params)
    
    Nf = 2
    
    println("Nf = $Nf")
    parameters_action = Dict()
    parameters_action["Nf"] = Nf
    fermi_action = FermiAction(D,parameters_action)

    y = similar(x)

    
    MDtest!(gauge_action,U,Dim,fermi_action,x,y)

end

HMC with fermions with stout smearing

We show the code of HMC with Wilson fermions with stout smearing.

using Gaugefields
using LatticeDiracOperators
using LinearAlgebra
using LatticeDiracOperators

function MDtest!(gauge_action,U,Dim,nn,fermi_action,η,ξ)
    p = initialize_TA_Gaugefields(U) #This is a traceless-antihermitian gauge fields. This has NC^2-1 real coefficients. 
    Uold = similar(U)
    dSdU = similar(U)
    
    substitute_U!(Uold,U)
    MDsteps = 10
    temp1 = similar(U[1])
    temp2 = similar(U[1])
    comb = 6
    factor = 1/(comb*U[1].NV*U[1].NC)
    numaccepted = 0
    

    numtrj = 100
    for itrj = 1:numtrj
        accepted = MDstep!(gauge_action,U,p,MDsteps,Dim,Uold,nn,dSdU,fermi_action,η,ξ)
        numaccepted += ifelse(accepted,1,0)

        plaq_t = calculate_Plaquette(U,temp1,temp2)*factor
        println("$itrj plaq_t = $plaq_t")
        println("acceptance ratio ",numaccepted/itrj)
    end
end

function calc_action(gauge_action,U,p)
    NC = U[1].NC
    Sg = -evaluate_GaugeAction(gauge_action,U)/NC #evaluate_GaugeAction(gauge_action,U) = tr(evaluate_GaugeAction_untraced(gauge_action,U))
    Sp = p*p/2
    S = Sp + Sg
    return real(S)
end


function MDstep!(gauge_action,U,p,MDsteps,Dim,Uold,nn,dSdU,fermi_action,η,ξ)
    

    Δτ = 1/MDsteps
    gauss_distribution!(p)

    Uout,Uout_multi,_ = calc_smearedU(U,nn)
    #Sold = calc_action(gauge_action,Uout,p)

    substitute_U!(Uold,U)

    gauss_sampling_in_action!(ξ,Uout,fermi_action)
    sample_pseudofermions!(η,Uout,fermi_action,ξ)
    Sfold = real(dot(ξ,ξ))
    println("Sfold = $Sfold")

    Sold = calc_action(gauge_action,U,p) + Sfold
    println("Sold = ",Sold)


    for itrj=1:MDsteps
        U_update!(U,p,0.5,Δτ,Dim,gauge_action)

        P_update!(U,p,1.0,Δτ,Dim,gauge_action)
        P_update_fermion!(U,p,1.0,Δτ,Dim,gauge_action,dSdU,nn,fermi_action,η)

        U_update!(U,p,0.5,Δτ,Dim,gauge_action)
    end

    Uout,Uout_multi,_ = calc_smearedU(U,nn)
    #Snew = calc_action(gauge_action,Uout,p)

    Sfnew = evaluate_FermiAction(fermi_action,Uout,η)
    println("Sfnew = $Sfnew")
    Snew = calc_action(gauge_action,U,p) + Sfnew
    

    println("Sold = $Sold, Snew = $Snew")
    println("Snew - Sold = $(Snew-Sold)")
    ratio = min(1,exp(-Snew+Sold))
    if rand() > ratio
        substitute_U!(U,Uold)
        return false
    else
        return true
    end
end

function U_update!(U,p,ϵ,Δτ,Dim,gauge_action)
    temps = get_temporary_gaugefields(gauge_action)
    temp1 = temps[1]
    temp2 = temps[2]
    expU = temps[3]
    W = temps[4]

    for μ=1:Dim
        exptU!(expU,ϵ*Δτ,p[μ],[temp1,temp2])
        mul!(W,expU,U[μ])
        substitute_U!(U[μ],W)
        
    end
end

function P_update!(U,p,ϵ,Δτ,Dim,gauge_action) # p -> p +factor*U*dSdUμ
    NC = U[1].NC
    temps = get_temporary_gaugefields(gauge_action)
    dSdUμ = temps[end]
    factor =  -ϵ*Δτ/(NC)

    for μ=1:Dim
        calc_dSdUμ!(dSdUμ,gauge_action,μ,U)
        mul!(temps[1],U[μ],dSdUμ) # U*dSdUμ
        Traceless_antihermitian_add!(p[μ],factor,temps[1])
    end
end


function P_update_fermion!(U,p,ϵ,Δτ,Dim,gauge_action,dSdU,nn,fermi_action,η)  # p -> p +factor*U*dSdUμ
    #NC = U[1].NC
    temps = get_temporary_gaugefields(gauge_action)
    UdSfdUμ = temps[1:Dim]
    factor =  -ϵ*Δτ

    Uout,Uout_multi,_ = calc_smearedU(U,nn)

    for μ=1:Dim
        calc_UdSfdU!(UdSfdUμ,fermi_action,Uout,η)
        mul!(dSdU[μ],Uout[μ]',UdSfdUμ[μ])
    end

    dSdUbare = back_prop(dSdU,nn,Uout_multi,U) 
    

    for μ=1:Dim
        mul!(temps[1],U[μ],dSdUbare[μ]) # U*dSdUμ
        Traceless_antihermitian_add!(p[μ],factor,temps[1])
        #println(" p[μ] = ", p[μ][1,1,1,1,1])
    end
end

function test1()
    NX = 4
    NY = 4
    NZ = 4
    NT = 4
    Nwing = 1
    Dim = 4
    NC = 3

    U  =Initialize_Gaugefields(NC,Nwing,NX,NY,NZ,NT,condition = "hot")


    gauge_action = GaugeAction(U)
    plaqloop = make_loops_fromname("plaquette")
    append!(plaqloop,plaqloop')
    β = 5.7/2
    push!(gauge_action,β,plaqloop)

    show(gauge_action)

    L = [NX,NY,NZ,NT]
    nn = CovNeuralnet()
    ρ = [0.1]
    layername = ["plaquette"]
    st = STOUT_Layer(layername,ρ,L)
    push!(nn,st)
    #push!(nn,st)

    x = Initialize_pseudofermion_fields(U[1],"Wilson")


    params = Dict()
    params["Dirac_operator"] = "Wilson"
    params["κ"] = 0.141139
    params["eps_CG"] = 1.0e-8
    params["verbose_level"] = 2
    D = Dirac_operator(U,x,params)


    parameters_action = Dict()
    fermi_action = FermiAction(D,parameters_action)

    y = similar(x)
    

    MDtest!(gauge_action,U,Dim,nn,fermi_action,x,y)

end


test1()

Acknowledgment

If you write a paper using this package, please refer this code.

BibTeX citation is following

@article{Nagai:2024yaf,
    author = "Nagai, Yuki and Tomiya, Akio",
    title = "{JuliaQCD: Portable lattice QCD package in Julia language}",
    eprint = "2409.03030",
    archivePrefix = "arXiv",
    primaryClass = "hep-lat",
    month = "9",
    year = "2024"
}

and the paper is arXiv:2409.03030.

Required Packages

Used By Packages