This package provides support for the CZI image format for microscopy in the Julia programming language. It is registered with the FileIO package.

Within Julia, perform the following:

julia> using Pkg

julia> Pkg.add(["ZeissMicroscopyFormat", "FileIO"])

This would add the package to whatever environment is currently active. Generally it is recommended to use project-specific environments. More information about package management can be found in the Pkg documentation.

In an environment with these packages installed, usage is as simple as

julia> using FileIO

julia> img = load("my_image_file.czi")

The format will be automatically detected by FileIO, which will load this package to import the specified file.

A general tool for viewing multidimensional images is ImageView.