MetaCommunityMetrics is a collection of tools and utilities for analyzing meta-communities in Julia. The current version is compatible with julia version 1.9.3.

Koma is a Pulseq-compatible framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.

Julia package for fitting regularized linear mixed-effect models on high-dimensional omics data.

Documentation with Documenter.jl and VitePress

Particle-in-Cell advection

Control barrier functions (CBFs) in Julia.

Main package for SeismicJulia project

Structure Preserving Machine Learning Models in Julia

Julia Evaluation of the Boltzmann Collision Integral for Relativistic, Anisotropic, Binary Interactions

Quantum many body systems with Pauli strings

A julia package implementing the kanones system for building Greek morphological parsers.

Rigorously defined orthographies for text in polytonic ancient Greek.

A simulator for ecological dynamics written in Julia.

MADS: Model Analysis & Decision Support

A julia package implementing the Tabulae system for building Latin morphological parsers.

Enigma decode/encode and cracking

A generic, simple and fast implementation of Deepmind's AlphaZero algorithm.

Tidier file reading and writing in Julia, modeled after the readr, haven, readxl, and writexl R packages.

A documentation generator for Julia.

Simulated Method of Moments for Julia

-

Implementation of domain specific language (DSL) for probabilistic graphical models

Quantum mechanical few body systems in Julia

DocumenterCitations.jl uses Bibliography.jl to add support for BibTeX citations and references in documentation pages generated by Documenter.jl.

Preallocated/Inplace linear algebra operations in julia

Julia library for visualization and annotation medical images, specialized particularly for rapid development segmentation of 3 dimensional images like CT or PET/CT scans. Has full support of nuclear medicine Data.

Automated Bayesian model discovery for time series data

Easy-to-use biological sequence tools working with DNA, RNA and aminoacid sequences.

A framework for composing and simulating multiphysics systems

A package for obtaining the effective time-averaged Lindbladian.

Julia package with selected functions in the R package `rethinking`. Used in the SR2... projects.

-

Bayesian inference on wiring diagrams.

This package contains a convenient analysis and visualization pipeline for simple dynamical models of neurons and networks of neurons.

Meta-package for data analysis in Julia, modeled after the R tidyverse.

-

A not-at-all useless addition to Julia's Dates standard lib to find penultimate days of the week, month, quarter, and year

Pipeline for debiasing and improving error bar estimates for photometry on top of structured/filamentary background.

This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).

Macros and functions to work with DSGE models.