Dependency Packages
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Jags.jl17Julia package for using Jags as an external program
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Stan.jl211Stan.jl illustrates the usage of the 'single method' packages, e.g. StanSample, StanOptimize, etc.
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Turing.jl2026Bayesian inference with probabilistic programming.
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DiffEqTutorials.jl713Tutorials for doing scientific machine learning (SciML) and high-performance differential equation solving with open source software.
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NeuralPDE.jl966Physics-Informed Neural Networks (PINN) Solvers of (Partial) Differential Equations for Scientific Machine Learning (SciML) accelerated simulation
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DiffEqBayes.jl121Extension functionality which uses Stan.jl, DynamicHMC.jl, and Turing.jl to estimate the parameters to differential equations and perform Bayesian probabilistic scientific machine learning
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MCMCChains.jl266Types and utility functions for summarizing Markov chain Monte Carlo simulations
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StatisticalRethinking.jl386Julia package with selected functions in the R package `rethinking`. Used in the SR2... projects.
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StanModels.jl7Stan versions of StatisticalRethinking models.
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TuringModels.jl163Implementations of the models from the Statistical Rethinking book with Turing.jl
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MambaModels.jl0DEPRECATED. Mamba versions of StatisticalRethinking models.
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CalibrateEmulateSample.jl84Stochastic Optimization, Learning, Uncertainty and Sampling
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MCMCBenchmarks.jl37Comparing performance and results of mcmc options using Julia
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StanSample.jl18WIP: Wrapper package for the sample method in Stan's cmdstan executable.
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StanVariational.jl0WIP: Wrapper package for the variational method in Stan's cmdstan executable.
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NestedSamplers.jl41Implementations of single and multi-ellipsoid nested sampling
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AlgebraOfGraphics.jl421Combine ingredients for a plot
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Firefly.jl2Like fireflies next to spotlights
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DifferentialEvolutionMCMC.jl14A Julia package for Differential Evolution MCMC
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ShipMMG.jl8Ship maneuvering simulation tool with respect to ShipMMG model
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Turkie.jl68Turing + Makie = Turkie
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EqualitySampler.jl2-
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AdditiveCellCom.jl1Generalized linear models for cell-cell communication
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SpmImageTycoon.jl13Organize Scanning Probe Microscopy (SPM, STM, AFM) Images and Spectra.
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SimulatedNeuralMoments.jl22Package for Bayesian and classical estimation and inference based on statistics that are filtered through a trained neural net
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SubspaceInference.jl5Subspace Inference package for uncertainty analysis in deep neural networks and neural ordinary differential equations using Julia
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StanQuap.jl0Quadratic approximation of posterior distribution using StanOptimize
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MCMCTempering.jl29Implementations of parallel tempering algorithms to augment samplers with tempering capabilities
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MCMCChainsStorage.jl2Library for storing your MCMCChains without serialization.
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Octofitter.jl29Octofitter is a Julia package for performing Bayesian inference against direct images of exoplanets, relative astrometry, and astrometric acceleration of the host star.
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BayesianNetworkRegression.jl9-
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UnfoldMakie.jl16Plotting tools for Unfold.jl based on Makie.jl and AlgebraOfGraphics.jl
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PosteriorPlots.jl20Graphical tools for Bayesian inference and posterior predictive checks
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DiffEqBayesStan.jl2Stan only version of DiffEqBayes.jl
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StatisticalRethinkingPlots.jl2Plots based plotting functions for StatisticalRethinking
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Plasma.jl34An interface for accelerated simulation of high-dimensional collisionless and electrostatic plasmas.
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AnimalBehavior.jl1[WIP] Wrapper package for simulation and bayesian inference of behavioral models
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AoGExtensions.jl3Extensions for AlgebraOfGraphics.jl
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TuringGLM.jl71Bayesian Generalized Linear models using `@formula` syntax.
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Dynare.jl86A Julia rewrite of Dynare: solving, simulating and estimating DSGE models.
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