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Algorithms for the transport of mass and energy in the environment

Julia simulation package for TKTD models

Julia interface to BioMASS

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Simple predictive models for tumor growth, and tools to apply them to clinical data

This package is a part of RSim, however, may also be used as an independent package for the calculation of source terms from an xml mechanism input file

A package for the calculation of steady state coverages for a given gas composition, T and p

Automatically Differentiate the backward Euler method

Julia package for different types of asset return or price models

This Julia package performs the numerical integration of two Approximated Master Equations on networks: the Cavity Master Equation and the Conditional Dynamic Approximation

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Reduced Basis Methods for Particle Systems

Valid Discrete-Time Methods for Relaxing pODEs

A Julia package for simulating the dynamics of passively crosslinked actin rings.

A package for the simulation of gas chromatography (GC) in complex systems

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Model associated to Elife paper Rodrigues et al. 2023

Models of aerosol chemistry and physics using ModelingToolkit.jl

This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).

Gross-Pitaevskii and Bogoliubov-de Gennes in 2D

Bounds and Relaxations of Parametric Differential Equations

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Repository for the Julia BOMBS package

Computation of UV line-driven winds in AGNs

PALEO framework modules (solvers, output, plots) for constructing standalone models

A package for the development and implementation of continuous-time policy gradient (CTPG) methods.

A Julia package to import Vensim .xmile files as ModelingToolkit.jl models.

A package for simulating batch reactor model with gasphase chemistry, surface chemistry or user defined chemistry

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Ecosystem of numerical methods for microbial kinetics data analysis, from preprocessing to result interpretation.

Models of atmospheric deposition using ModelingToolkit.jl

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Julia package to facilitate the construction of JumpProblems on graphs.

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Differential Inequality Algorithms for Parametric ODEs

A Julia package for building, and running Biochemical Systems Theory (BST) models

Epidemic spatial and temporal model setup and simulation. Focusing on state of the art epidemiology models such as universal differential equations, epidemiology-informed deep learning models. Part of Mathepia.jl