Dependency Packages
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PhyloNetworks.jl155A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks
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PrettyTables.jl403Print data in formatted tables.
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TranscodingStreams.jl85Simple, consistent interfaces for any codec.
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JLD2.jl549HDF5-compatible file format in pure Julia
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ChainRulesCore.jl253AD-backend agnostic system defining custom forward and reverse mode rules. This is the light weight core to allow you to define rules for your functions in your packages, without depending on any particular AD system.
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ForwardDiff.jl888Forward Mode Automatic Differentiation for Julia
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DataStructures.jl690Julia implementation of Data structures
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NLopt.jl262A Julia interface to the NLopt nonlinear-optimization library
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DataFrames.jl1725In-memory tabular data in Julia
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Reexport.jl162Julia macro for re-exporting one module from another
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StatsFuns.jl232Mathematical functions related to statistics.
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Optim.jl1116Optimization functions for Julia
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BioSequences.jl150Biological sequences for the julia language
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StatsBase.jl584Basic statistics for Julia
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MathOptInterface.jl388A data structure for mathematical optimization problems
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InvertedIndices.jl81A simple index type that allows for inverted selections
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BenchmarkTools.jl607A benchmarking framework for the Julia language
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PrecompileTools.jl204Reduce time-to-first-execution of Julia code
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Rmath.jl16Archive of functions that emulate R's d-p-q-r functions for probability distributions
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Distributions.jl1102A Julia package for probability distributions and associated functions.
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Graphs.jl457An optimized graphs package for the Julia programming language
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HypergeometricFunctions.jl68A Julia package for calculating hypergeometric functions
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Compat.jl145Compatibility across Julia versions
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StatsAPI.jl17A statistics-focused namespace for packages to share functions
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CSV.jl466Utility library for working with CSV and other delimited files in the Julia programming language
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DocStringExtensions.jl114Extensions for Julia's docsystem.
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PositiveFactorizations.jl38Positive-definite "approximations" to matrices
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JSON.jl311JSON parsing and printing
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QuadGK.jl268Adaptive 1d numerical Gauss–Kronrod integration in Julia
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FillArrays.jl181Julia package for lazily representing matrices filled with a single entry
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ArrayInterface.jl133Designs for new Base array interface primitives, used widely through scientific machine learning (SciML) and other organizations
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Inflate.jl24Julia implementation of zlib decompression
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FilePathsBase.jl79Filesystem path types in julia
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StaticArrays.jl761Statically sized arrays for Julia
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Tables.jl299An interface for tables in Julia
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MutableArithmetics.jl49Interface for arithmetics on mutable types in Julia
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LaTeXStrings.jl207Convenient input and display of LaTeX equation strings for the Julia language
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FileIO.jl216Main Package for IO, loading all different kind of files
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MacroTools.jl310MacroTools provides a library of tools for working with Julia code and expressions.
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Parameters.jl419Types with default field values, keyword constructors and (un-)pack macros
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