23 Packages since 2013
User Packages
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HealthSampleData.jl1Sample health data for a variety of health formats and use cases
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OMOPCDMDatabaseConnector.jl1Utility package to connect to databases in the OMOP CDM format
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OMOPCDMCohortCreator.jl3Create cohorts from databases utilizing the OMOP CDM
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ICD_GEMs.jl14ICD_GEMs.jl is a Julia package that allows to translate ICD-9 codes in ICD-10 and viceversa via the General Equivalence Mappings (GEMs) of the International Classification of Diseases (ICD).
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DiagnosisClassification.jl1Mappings between different systems for classifying diagnoses and problems
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EHRAuthentication.jl0Helper code for authenticating to various electronic health record (EHR) systems
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FHIRClientXML.jl0FHIR client for servers that only support XML
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SMARTBackendServices.jl0Server-to-server FHIR connections
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SMARTAppLaunch.jl1Implementation of the SMART App Launch Framework for building SMART on FHIR applications
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FHIRClientJSON.jl0Deprecated in favor of FHIRClient.jl
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PubChemCrawler.jl16Utilities to programmatically query the PubChem database
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PharmaceuticalClassification.jl3Mappings between different systems for classifying medications
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DICOMClient.jl1Julia client for connecting to DICOM (Digital Imaging and Communications in Medicine) servers by using the DICOMweb RESTful services
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FHIRClient.jl6Julia client for connecting to FHIR (Fast Healthcare Interoperability Resources) servers and building SMART on FHIR applications
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OMOPCommonDataModel.jl4Pure Julia implementation of the OMOP Common Data Model (CDM)
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DateShifting.jl0Reduce re-identification risk while preserving temporal relationships in health data sets
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HealthMLBase.jl1-
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HealthBase.jl5Common namespace for functions and interfaces in the JuliaHealth ecosystem
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CAOS.jl3Julia implementation of the characteristic attribute organization system (CAOS) algorithm
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ARules.jl11Julia package for association rule learning
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BioMedQuery.jl17Julia utilities for interacting with biomedical databases and biomedical application programming interfaces (APIs)
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PubMedMiner.jl8Julia package for studying co-occurrences in PubMed articles
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DICOM.jl49Julia package for reading and writing DICOM (Digital Imaging and Communications in Medicine) files
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