NaturalNeighbours.jl

Natural neighbour interpolation methods for scattered data interpolation and derivative generation of planar point sets.
Author DanielVandH
Popularity
22 Stars
Updated Last
4 Months Ago
Started In
May 2023

NaturalNeighbours

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This is a package for performing natural neighbour interpolation over planar data sets (amongst some others, like piecewise linear interpolation via triangles or nearest neighbour interpolation -- see the docs), using DelaunayTriangulation.jl to construct the Voronoi tessellations that represents the spatial information. Most of the work in this package is based on this great thesis.

This is not the only package for interpolation. If the methods available here do not suit your needs, see Interpolations.jl and the packages it links to in its README.

Here is a quick example of how to use the package, demonstrating the available methods for interpolation. See the docs for more examples, including examples for derivative generation. In this example, note that even though we evaluate the interpolant at $100^2$ points, the runtime is extremely fast thanks to the interpolant being local rather than global.

using NaturalNeighbours
using CairoMakie

## The data 
f = (x, y) -> sin(x * y) - cos(x - y) * exp(-(x - y)^2)
x = vec([(i - 1) / 9 for i in (1, 3, 4, 5, 8, 9, 10), j in (1, 2, 3, 5, 6, 7, 9, 10)])
y = vec([(j - 1) / 9 for i in (1, 3, 4, 5, 8, 9, 10), j in (1, 2, 3, 5, 6, 7, 9, 10)])
z = f.(x, y)

## The interpolant and grid 
itp = interpolate(x, y, z; derivatives=true)
xg = LinRange(0, 1, 100)
yg = LinRange(0, 1, 100)
_x = vec([x for x in xg, _ in yg])
_y = vec([y for _ in xg, y in yg])
exact = f.(_x, _y)

## Evaluate some interpolants 
sibson_vals = itp(_x, _y; method=Sibson())
triangle_vals = itp(_x, _y; method=Triangle())
laplace_vals = itp(_x, _y; method=Laplace())
sibson_1_vals = itp(_x, _y; method=Sibson(1))
nearest_vals = itp(_x, _y; method=Nearest())
farin_vals = itp(_x, _y; method=Farin())
hiyoshi_vals = itp(_x, _y; method=Hiyoshi(2))

## Plot 
function plot_2d(fig, i, j, title, vals, xg, yg, x, y, show_scatter=true)
    ax = Axis(fig[i, j], xlabel="x", ylabel="y", width=600, height=600, title=title, titlealign=:left)
    contourf!(ax, xg, yg, reshape(vals, (length(xg), length(yg))), colormap=:viridis, levels=-1:0.05:0, extendlow=:auto, extendhigh=:auto)
    show_scatter && scatter!(ax, x, y, color=:red, markersize=14)
end
function plot_3d(fig, i, j, title, vals, xg, yg)
    ax = Axis3(fig[i, j], xlabel="x", ylabel="y", width=600, height=600, title=title, titlealign=:left)
    surface!(ax, xg, yg, reshape(vals, (length(xg), length(yg))), color=vals, colormap=:viridis)
end

all_vals = (sibson_vals, triangle_vals, laplace_vals, sibson_1_vals, nearest_vals, farin_vals, hiyoshi_vals, exact)
titles = ("(a): Sibson", "(b): Triangle", "(c): Laplace", "(d): Sibson-1", "(e): Nearest", "(f): Farin", "(g): Hiyoshi", "(h): Exact")
fig = Figure(fontsize=55)
for (i, (vals, title)) in enumerate(zip(all_vals, titles))
    plot_2d(fig, 1, i, title, vals, xg, yg, x, y, !(vals === exact))
    plot_3d(fig, 2, i, " ", vals, xg, yg)
end
resize_to_layout!(fig)
fig

# could keep going and differentiating, etc...
# ∂ = differentiate(itp, 2) -- see the docs.

Interpolation example