VCFTools.jl

Julia utilities for handling VCF files
Author OpenMendel
Popularity
9 Stars
Updated Last
1 Year Ago
Started In
August 2017

VCFTools

Documentation Build Status Code Coverage Citation
build Actions Status CI (Julia nightly) codecov DOI

VCFTools.jl provide Julia utilities for handling VCF files.

Installation

Within Julia, press ] to use the package manager and type:

(v1.5) pkg> add https://github.com/OpenMendel/VCFTools.jl

This package supports Julia v1.5+.

Citation

If you use OpenMendel analysis packages in your research, please cite the following reference in the resulting publications:

Zhou H, Sinsheimer JS, Bates DM, Chu BB, German CA, Ji SS, Keys KL, Kim J, Ko S, Mosher GD, Papp JC, Sobel EM, Zhai J, Zhou JJ, Lange K. (2020) OPENMENDEL: a cooperative programming project for statistical genetics, Hum Genet, 139:61-71. doi: 10.1007/s00439-019-02001-z.

Acknowledgments

This project is supported by the National Institutes of Health under NIGMS awards R01GM053275 and R25GM103774 and NHGRI award R01HG006139.