Dependency Packages
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DynamicBoundspODEsDiscrete.jl1Valid Discrete-Time Methods for Relaxing pODEs
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PALEOaqchem.jl1Aquatic biogeochemistry for PALEO framework
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PALEOsediment.jl1PALEOtoolkit sediment components and standalone examples
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ParametricDFNOs.jl1-
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PathWeightSampling.jl1Julia implementation of Path Weight Sampling (PWS) to compute information transmission rates
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MaximumIndependentSet.jl1Julia wrapper for the maximum independent set method
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PeriodicGraphEquilibriumPlacement.jl1Algorithm for barycentric (a.k.a. equilibrium) placement of vertices of a periodic graph
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ClusterDepth.jl1-
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MaximumEntropyMomentClosures.jl1Methods for the evaluation of maximum entropy distributions
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PhysiologyModeling.jl1-
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PhysiologyPlotting.jl1Plotting tools for ElectroPhysiology.jl
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PlantGraphs.jl1Dynamic graphs for simulating plant growth and development
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CIMOptimizer.jl1Cim-optimizer wrapper for JuMP
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WebToys.jl1Fun toys built on top of JuliaGizmos projects!
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ManifoldGroupUtils.jl1Useful functions to work with groups defined in Manifolds.jl
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ManifestUtilities.jl1Tools for manipulating Julia manifest files and their associated dependency graphs
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MambaLite.jl1Light-weight copy of Mamba.jl
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PooksoftAssetModelingKit.jl1Julia package for different types of asset return or price models
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PowerDynSolve.jl1Subpackage of PowerDynamics.jl providing the functionality to solve/simulate the built models
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PowerSystemsMaps.jl1-
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BundlerIO.jl1Reading and writing Bundler files with Julia
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QuantumCliffordPlots.jl1-
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BranchFlowModel.jl1An easy to use implementation of the Branch Flow Model using JuMP for optimal power flow problems
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ElectroPhysiology.jl1-
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BPGates.jl1-
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AdditiveCellCom.jl1Generalized linear models for cell-cell communication
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GasChromatographySystems.jl1A package for the simulation of gas chromatography (GC) in complex systems
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JordanForm.jl1An _educational_ implementation for computing the Jordan form and its transformation matrix.
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ReactionNetworkEvolution.jl1This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).
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ITensorUnicodePlots.jl1-
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ReducedBasisMethods.jl1Reduced Basis Methods for Particle Systems
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BioFindr.jl1Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia
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RobustBlindVerification.jl1-
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EpithelialDynamics1D.jl1Simulations of epithelial dynamics in 1D.
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Seleroute.jl1Optimise routing in computer networks.
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SemanticTrajectories.jl1-
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ShellStructureTopo.jl1Detect topological entities on a triangular surface mesh.
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SMLMData.jl1Data types and utilities for SMLM coordinate data.
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SMLMFrameConnection.jl1Frame-connection on localization microscopy data
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SMLMMetrics.jl1Metrics for SMLM
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