Dependency Packages
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GeneticScreens.jl0Pre- and post-processing for the analysis of high-throughput genetic screens using matrix linear models.
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FractalAnimation.jl0-
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FirstPassageTools.jl0Tools for working with first-passage time distributions for continuous-time, discrete-state Markov processes
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WolfRiverPlots.jl0-
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WeightedEdgeListFormat.jl0A small package that I needed for multiple Pluto.jl projects and wanted to access easily.
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VLModelParametersDB.jl0A Julia wrapper around a SQLite database that holds model parameters
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ExpressCommands.jl0The command-line interface of Express.jl
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VLConstraintBasedModelGenerationUtilities.jl0A package holding constraint based model generation utility type functions and types
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DoNOF.jl0-
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DeepForest.jl0DeepForest Impletmentation in Julia
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VisualizeMotifs.jl0-
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VeriQuEST.jl0Simulating quantum computing verification
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TemporalNetworks.jl0-
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SunAsAStar.jl0Routines to compute extra information needed for Sun-as-a-star observations
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ArviZPythonPlots.jl0-
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StringMethod.jl0Julia implementation of the String Method for computing transition paths and saddle points on energy landscapes
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CycleSolver.jl0Package for solving steady state thermodynamic cycles
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StanVariational.jl0WIP: Wrapper package for the variational method in Stan's cmdstan executable.
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BacenSGS.jl0-
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StanPathfinder.jl0Package to run Stan's pathfinder command using cmdstan as an external program
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BayesSizeAndShape.jl0Bayesian regression models for size-and-shape data
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BcdiStrain.jl0-
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SpinGlassNetworks.jl0-
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BeastUtils.jl0-
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BEASTDataPrep.jl0Standard data cleaning tools prior to generating BEAST xml file
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SpatialOmicsGPs.jl0Gaussian process models for spatial transcriptomics
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BHAPtfem.jl0BHA analysis using PtFEM (currently used as a limited check on BHAtp's FEM results).
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SparseSensors.jl0Sparse sensor placement in Julia
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PooksoftOptionsKit.jl0Julia package with methods for computing options pricing, profit and loss
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PhysicalFFT.jl0FFT solvers in Julia language
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BipartiteNull.jl0BipartiteNull. jl is a tool for building null model of bipartite network.
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OceanDistributions.jl0Distributions of ocean properties
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NeXLMatrixCorrection.jl0EPMA matrix correction algorithms
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NarmViz.jl0Visualize time series numerical association rules
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MultiDimEquations.jl0Write multi-dimensional equations in Julia using an easy and compact syntax
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MPSToolkit.jl0-
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MosimoBase.jl0Some basic and utility functions for molecular simulation.
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MLJSerialization.jl0-
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MimiMooreEtAlAgricultureImpacts.jl0-
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ClimaCache.jl0ClimaCache.jl is designed to share information among different CliMA modules. All public types and structs are supposed to live here.
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