Dependency Packages
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GasChem.jl4Models of gas-phase atmospheric chemistry and related processes
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TransitionMatrices.jl4-
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CBLS.jl4A MOI/JuMP interface for `LocalSearchSolvers.jl`, a Constraint-Based Local Search (CBLS) framework
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SBMLToolkitTestSuite.jl4Functions to run the SBML Test Suite with SBMLToolkit, create logs and create reports for the SBML Test Suite Database
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PatternFolds.jl3A Julia package to efficiently handle repetitive patterns
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Constraints.jl3Shared package to handle constraints for the different solvers from JuliaConstraints
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Bactos.jl3Agent-based modeling framework for bacterial behavior, based on Agents.jl
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DiffPointRasterisation.jl3Differentiable rasterisation of point clouds in julia
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RadialBasisFunctions.jl3Radial Basis Functions in Julia
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SauterSchwabQuadrature.jl3Implementation of the Sauter-Schwab quadrature rules
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GeoStatsProcesses.jl3Geostatistical processes for the GeoStats.jl framework
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EarthSciMLBase.jl3Basic functionality for EarthSciML system
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NetworkJumpProcesses.jl3Julia package to facilitate the construction of JumpProblems on graphs.
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ConstraintCommons.jl3Common code to be shared between repositories of JuliaConstraints
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LinearNoiseApproximation.jl3This package provides a numerical method of applying linear noise approximation (LNA) to a given reaction system
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CurvilinearGrids.jl3A Julia library for working with curvilinear grids
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ContinuousTimePolicyGradients.jl2A package for the development and implementation of continuous-time policy gradient (CTPG) methods.
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EmpiricalPotentials.jl2Empirical interatomic potentials with Julia, AtomsBase and AtomsCalculators
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EarthSciData.jl2-
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DiffEqBayesStan.jl2Stan only version of DiffEqBayes.jl
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Peccon.jl2The julia library for the peccon project
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Vensim2MTK.jl2A Julia package to import Vensim .xmile files as ModelingToolkit.jl models.
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GeoStatsValidation.jl2Validation methods for the GeoStats.jl framework
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MDLovoFit.jl2Julia wrapper for the MDLovoFit package
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GeoStatsModels.jl2Geostatistical models for the GeoStats.jl framework
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QUBOConstraints.jl2Julia package to automatically learn QUBO matrices from optimisation constraints
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AtomsCalculatorsUtilities.jl2Utilities for implementing AtomsCalculators
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FinEtoolsMultithreading.jl2Parallel finite element library
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Kinbiont.jl2Ecosystem of numerical methods for microbial kinetics data analysis, from preprocessing to result interpretation.
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AtmosphericDeposition.jl2Models of atmospheric deposition using ModelingToolkit.jl
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EquilibratedFlux.jl2-
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SynapseElife.jl1Model associated to Elife paper Rodrigues et al. 2023
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SoEwald2D.jl1Sum of Exponentials method accelerated Ewald2D method
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Aerosol.jl1Models of aerosol chemistry and physics using ModelingToolkit.jl
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PairVelocities.jl1-
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MembraneAnalysis.jl1A package for analyzing molecular dynamics simulations of lipid membranes
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QuasiEwald.jl1This is a julia package for Quasi Ewald method.
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EwaldSummations.jl1Implementation of standard Ewald2D and Ewald3D methods.
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PathWeightSampling.jl1Julia implementation of Path Weight Sampling (PWS) to compute information transmission rates
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UnitTypes.jl1Provides Julia types for physical units
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