Dependency Packages
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DataStructures.jl690Julia implementation of Data structures
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PrecompileTools.jl204Reduce time-to-first-execution of Julia code
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Automa.jl186A julia code generator for regular expressions
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BioSequences.jl150Biological sequences for the julia language
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Compat.jl145Compatibility across Julia versions
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Preferences.jl129Project Preferences Package
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OrderedCollections.jl92Julia implementation of associative containers that preserve insertion order
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TranscodingStreams.jl85Simple, consistent interfaces for any codec.
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FASTX.jl61Parse and process FASTA and FASTQ formatted files of biological sequences.
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BioAlignments.jl60Sequence alignment tools
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CodecZlib.jl50Zlib codecs for TranscodingStreams.jl.
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StringViews.jl46String-like views of arbitrary Julia byte arrays
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IntervalTrees.jl44A data structure for efficient manipulation of sets of intervals
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GenomicFeatures.jl32Tools for genomic features in Julia.
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BioSymbols.jl30Nucleic and amino acid primitive types
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XAM.jl27Parse and process SAM and BAM formatted files
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BGZFStreams.jl13BGZF Stream
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BioGenerics.jl12Generic methods, types and modules for the BioJulia ecosystem.
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Twiddle.jl7A collection of useful bit-twiddling tricks in Julia.
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LibDeflate.jl7Julia bindings for libdeflate
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Indexes.jl3-
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CodecBGZF.jl2BGZF codecs for TranscodingStreams.jl
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