The GenomicFeatures package provides utilities for working with interval based genomic annotations. It builds on IntervalTrees to provide a data-structures and algorithms for various formats such as BED, GFF3, bigWig and bigBed.
You can install the GenomicFeatures package from the Julia REPL.
] to enter pkg mode, then enter the following command:
If you are interested in the cutting edge of the development, please check out the develop branch to try new features before release.
GenomicFeatures is tested against Julia
1.X on Linux, OS X, and Windows.
Latest build status:
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