YARS communication for julia

Simulate sequence data and complicated pedigree structures

Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:

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Exact Variance Component Test for GWAS

Phylogenetic tree type for julia

Statistical analysis of genomic data

Julia Spiking Neural Network Simulator

Spike sorting tools written in Julia, which may be of use to experimental neuroscientists

Estimation of coalescence times between sequences.

Julia framework for spatial ecology - data types and utilities

Compressed storage for SNP data

Macaque brain and skull extraction tools (WIP)

A bioinformatics library for solving problems from rosalind.info.

Receiver Operating Characteristic (ROC) Curve for Julia Language

A unified framework for skeletonization, morphological analysis, and connectivity analysis.

Code for the Pure-seq project

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Progressive alignment scripts for protein sequences

Population Genetics in Julia

A lightweight and powerful Julia package for computational pipelines and workflows.

Phylogenetic trees in Julia

A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks

Pedigree functions implemented in Julia

Simulation, visualization, and inference of individual level infectious disease models with Julia

Detect correlated evolution on phylogenies

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(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

A set of tools to load data written by the OpenEphys GUI

Optimal Bayesian classification for RNA-Seq data

NormalizeQuantiles.jl implements quantile normalization

Neuroimaging in Julia

Neural Signal Analysis

Methods for inferring undirected networks from data

Julia implemention of NEAT (NeuroEvolution of Augmenting Topologies) algorithm

A julia package to parse and write MMTF file

Mutual Information Tools for protein Sequence analysis in Julia

Access data sets from the Mind Research Repository

Easily embed annotations in your microscopy images

For analysis of microbiome and microbial community data