Biology Packages
-
YARS.jl0YARS communication for julia
-
XSim.jl6Simulate sequence data and complicated pedigree structures
-
VariantCall.jl1-
-
VarianceComponentTest.jl4Exact Variance Component Test for GWAS
-
TimeTrees.jl3Phylogenetic tree type for julia
-
StatGenData.jl1Statistical analysis of genomic data
-
SpikeSorter.jl7Spike sorting tools written in Julia, which may be of use to experimental neuroscientists
-
SpeedDate.jl3Estimation of coalescence times between sequences.
-
SpatialEcology.jl38Julia framework for spatial ecology - data types and utilities
-
SnpArrays.jl26Compressed storage for SNP data
-
SkullSegment.jl3Macaque brain and skull extraction tools (WIP)
-
Rosalind.jl0A bioinformatics library for solving problems from rosalind.info.
-
ROC.jl12Receiver Operating Characteristic (ROC) Curve for Julia Language
-
PureSeq.jl1Code for the Pure-seq project
-
PumasTutorials.jl33Tutorials for pharmaceutical modeling and simulation with Pumas.jl
-
PseudoGenomes.jl0-
-
ProgressiveAligner.jl7Progressive alignment scripts for protein sequences
-
Pipelines.jl4A lightweight Julia package for computational pipelines and workflows.
-
PhyloTrees.jl12Phylogenetic trees in Julia
-
PhyloNetworks.jl94A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks
-
Pathogen.jl59Simulation, visualization, and inference tools for modelling the spread of infectious diseases with Julia
-
Pagel.jl2Detect correlated evolution on phylogenies
-
OrbitTomography.jl1-
-
OpenGene.jl58(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia
-
OpenEphysLoader.jl5A set of tools to load data written by the OpenEphys GUI
-
OBC.jl0Optimal Bayesian classification for RNA-Seq data
-
NormalizeQuantiles.jl6NormalizeQuantiles.jl implements quantile normalization
-
NeuroAnalysis.jl5Neural Signal Analysis
-
NEAT.jl22Julia implemention of NEAT (NeuroEvolution of Augmenting Topologies) algorithm
-
MMTF.jl7A julia package to parse and write MMTF file
-
MIToS.jl39Mutual Information Tools for protein Sequence analysis in Julia
-
MindResearchRepository.jl2Access data sets from the Mind Research Repository
-
MicroscopyLabels.jl3Easily embed annotations in your microscopy images
-
MerCounting.jl7K-mer counting algorithms and count-data utilities for the BioJulia framework
-
MendelBase.jl5MendelBase contains the base functions of OpenMendel.
-
LeafAreaIndex.jl6Package to calculate Leaf Area Index from Hemisperical Images.
-
LCS.jl7A Julia package for finding longest common and longest contiguous subsequences
-
JWAS.jl44Julia for Whole-genome Analysis Software
-
IntervalTrees.jl26A data structure for efficient manipulation of sets of intervals
-
Iceberg.jl1Ice-seawater interface calculations using level set methods
Loading more...