Microbiome.jl is a package for manipulating and analyzing microbiome and microbial community data.
Install Microbiome from the Julia REPL:
julia> using Pkg julia> pkg"add Microbiome"
If you are interested in the cutting edge of the development, please check out the master branch to try new features before release.
julia> pkg"add Microbiome#master"
- You might also be interested in some functionality provided by BiobakeryUtils.jl.
- Microbiome.jl uses EcoBase under the hood for many of its types and methods.
- Microbiome.jl has a
Tables.jlinterface, so you can convert
CommunityProfileis not yet a sink itself