A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks

Chemical reaction network and systems biology interface for scientific machine learning (SciML). High performance, GPU-parallelized, and O(1) solvers in open source software.

Biological sequences for the julia language

A library of data interpolation and smoothing functions

Package to calculate Leaf Area Index from Hemisperical Images.

Population Genetics in Julia

Julia for Whole-genome Analysis Software

Methods for inferring undirected networks from data

Implementation of normalising flows and constrained random variable transformations

A multi-dimensional, high performance deconvolution framework written in Julia Lang for CPUs and GPUs.

For analysis of microbiome and microbial community data

Estimation of coalescence times between sequences.

[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia

Algorithms from circuit theory to predict connectivity in heterogeneous landscapes

A Julia package to analyze protein sequences, structures, and evolutionary information

Utilities to read/write FASTA format files in Julia

Compressed storage for SNP data

CellMLToolkit.jl is a Julia library that connects CellML models to the Scientific Julia ecosystem.

Plotting and interface tools for biology.

A Julia package to read, write and manipulate macromolecular structures

Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:

A lightweight and powerful Julia package for computational pipelines and workflows.

A unified framework for skeletonization, morphological analysis, and connectivity analysis.

Sequence alignment tools

Julia package for diversity measurement

High-level, high-performance, constraint-based reconstruction and analysis in Julia

Easily embed annotations in your microscopy images

Inference of microbial interaction networks from large-scale heterogeneous abundance data

Receiver Operating Characteristic (ROC) Curve for Julia Language

🧬High-performance genetics- and genomics-related data visualization using Makie.jl

Choo-choo

Stochastic Gillespie-type simulations using Julia

A Julia package to read and write MMTF files

A Julia package to efficiently fold all local and long-range RNA duplexes.

✂️ Pooled CRISPR screen optimization tool

Datastructures and algorithms for working with genetic variation

Parse and process FASTA and FASTQ formatted files of biological sequences.

A modern genomics framework for julia

A data structure for efficient manipulation of sets of intervals

Neural Signal Analysis