GenomeGraphs.jl

A modern genomics framework for julia
Popularity
29 Stars
Updated Last
3 Months Ago
Started In
February 2019

GenomeGraphs

Latest release MIT license Stable documentation Pkg Status Chat

Description

GenomeGraphs provides a representation of sequence graphs. Such graphs represent genome assemblies and population graphs of genotypes/haplotypes and variation.

Installation

You can install GenomeGraphs from the julia REPL. Press ] to enter pkg mode again, and enter the following:

pkg> add GenomeGraphs

If you are interested in the cutting edge of the development, please check out the master branch to try new features before release.

Testing

GenomeGraphs is tested against Julia 1.X on Linux, OS X, and Windows.

Latest build status:

Unit tests

Contributing

We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.

Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.

Financial contributions

We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development of the community, it will be "merged" in the ledger of our open collective by the core contributors and the person who filed the expense will be reimbursed.

Backers & Sponsors

Thank you to all our backers and sponsors!

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backers

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Questions?

If you have a question about contributing or using BioJulia software, come on over and chat to us on Gitter, or you can try the Bio category of the Julia discourse site.

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