Simulate sequence data and complicated pedigree structures

K-mer counting algorithms and count-data utilities for the BioJulia framework

Sequence alignment tools

A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks

Simulation, visualization, and inference tools for modelling the spread of infectious diseases with Julia

A modern genomics framework for julia

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

A data structure for efficient manipulation of sets of intervals

Phylogenetic trees in Julia

Stochastic Gillespie-type simulations using Julia

Progressive alignment scripts for protein sequences

Estimation of coalescence times between sequences.

Utilities to read/write FASTA format files in Julia

Phylogenetic tree type for julia

(No maintenance) Detect gene fusion directly from raw fastq files

A Julia package for finding longest common and longest contiguous subsequences

Julia's package for working on Bioinformatics with DNA, RNA and Protein Sequences

Ensemble Samplers for Julia

HyperNEAT

Extension to ArgParse.jl, enabling parsing of command line parameters to types in Bio.jl.

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Code for the Pure-seq project

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Optimal Bayesian classification for RNA-Seq data

YARS communication for julia

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Manage Local Genome Annotation files

Detect correlated evolution on phylogenies

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