KmerAnalysis
Description
A k-mer counting and analysis tool-box for Julia.
Provides k-mer counting utilities, as well as k-mer spectra and coverage analysis routines.
Installation
You can install KmerAnalysis from the julia REPL. Press ]
to enter pkg mode
again, and enter the following:
pkg> add KmerAnalysis
To add it to your environment.
You may also want the add-on package KmerAnalysisMakie.jl, which provides AbstractPlotting recipes for the types in this package.
Testing
KmerAnalysis is tested against Julia 1.X
on Linux, OS X, and Windows.
Latest build status:
Contributing
We appreciate contributions from users including reporting bugs, fixing issues, improving performance and adding new features.
Take a look at the contributing files detailed contributor and maintainer guidelines, and code of conduct.
Financial contributions
We also welcome financial contributions in full transparency on our open collective. Anyone can file an expense. If the expense makes sense for the development of the community, it will be "merged" in the ledger of our open collective by the core contributors and the person who filed the expense will be reimbursed.
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Questions?
If you have a question about contributing or using BioJulia software, come on over and chat to us on Gitter, or you can try the Bio category of the Julia discourse site.