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Detect correlated evolution on phylogenies

Manage Local Genome Annotation files

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YARS communication for julia

Optimal Bayesian classification for RNA-Seq data

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Code for the Pure-seq project

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Extension to ArgParse.jl, enabling parsing of command line parameters to types in Bio.jl.

HyperNEAT

Ensemble Samplers for Julia

Utilities to read/write FASTA format files in Julia

Progressive alignment scripts for protein sequences

Estimation of coalescence times between sequences.

Stochastic Gillespie-type simulations using Julia

(No maintenance) OpenGene, core libraries for NGS data analysis and bioinformatics in Julia

(No maintenance) Detect gene fusion directly from raw fastq files

Simulation, visualization, and inference of individual level infectious disease models with Julia

Phylogenetic tree type for julia

A Julia package for finding longest common and longest contiguous subsequences

Simulate sequence data and complicated pedigree structures

Sequence alignment tools

A data structure for efficient manipulation of sets of intervals

K-mer counting algorithms and count-data utilities for the BioJulia framework

A modern genomics framework for julia

Phylogenetic trees in Julia

A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks

🧬High-performance genetics-related data visualization using Makie.jl