Just include the Bioinformatics.jl file with
include("Bioinformatics.jl")or install the library with
(v1.1) pkg> add "https://github.com/mrtkp9993/Bioinformatics.jl"and you're ready to use!
- Global alignment (Needleman-Wunsch algorithm with linear gap penalty)
- Dotplots
- Transcription, Reverse Complement, Translation, Open reading frames (ORFs)
- GC-content, minimum skew
- Protein mass, Extinction coefficient, Instability index, Isoelectric point, Grand average of hydropathicity (GRAVY) statistics of protein sequences
Please refer here.
If you find any bugs/issues, please create an issue or fix and create a pull request.
GNU General Public License v3.0 © Murat Koptur