Bioinformatics.jl

Usage

Just include the Bioinformatics.jl file with

include("Bioinformatics.jl")

or install the library with

(v1.1) pkg> add "https://github.com/mrtkp9993/Bioinformatics.jl"

and you're ready to use!

Features

• Global alignment (Needleman-Wunsch algorithm with linear gap penalty)
• Dotplots
• Transcription, Reverse Complement, Translation, Open reading frames (ORFs)
• GC-content, minimum skew
• Protein mass, Extinction coefficient, Instability index, Isoelectric point, Grand average of hydropathicity (GRAVY) statistics of protein sequences

Documentation

Please refer here.

Contribute

If you find any bugs/issues, please create an issue or fix and create a pull request.

License

GNU General Public License v3.0 © Murat Koptur