(Hierarchical) Phylogenetic Models in Julia
Author erathorn
6 Stars
Updated Last
1 Year Ago
Started In
May 2019


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This package offers the functionality for phylogenetic computations in Julia. It is an extension of the Mamba package which implements different variants of Markov Chain Monte Carlo (MCMC) sampling for Bayesian analysis. ( MCPhylo extends Mamba to perform phylogenetic computations.

This module is build on a forked instance of Mamba 0.12.0

The documentation can be found here.


If you use this software in an academic publication please cite the following paper No-U-Turn sampling for phylogenetic trees, Wahle (2021). (bioRxiv Paper)

General Information

This package can be installed via the official Julia PackageManager.

using Pkg

The latest functionalities can be obtained by installing the it directly from the GitHub source.

using Pkg