CUDA solver for Metida.jl

Estimation of Shannon Entropy for Discrete Random Variables

Frame-connection on localization microscopy data

Metrics for SMLM

MetaCommunityMetrics is a collection of tools and utilities for analyzing meta-communities in Julia. The current version is compatible with julia version 1.9.3.

[WIP] Wrapper package for simulation and bayesian inference of behavioral models

Julia implementation of stochastic gradient algorithms (SCSG , SVRG)

Models of aerosol chemistry and physics using ModelingToolkit.jl

Makie visualization module for TopOpt.jl

Automatically Differentiate the backward Euler method

This package provides utility structs and functions to support solving RL problems

A Julia package for simulating Social Sampling Theory

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Implementation of Guided Proposals (introduced by M Schauer, F van der Meulen, H van Zanten)

CurricularVisualization.jl is an extension of the CurricularAnalytics.jl toolbox for visualizing curricula and degree plans.

🪴 example of root system architecture simulation like CRootBox

Small package to extract coordinates of countries border

Estimate LoD from data

A package for analyzing molecular dynamics simulations of lipid membranes

A Julia package for plotting sequential sampling models

Julia implementation of *l*_1-norm clusterpath (Hocking et al., 2011, Radchenko & Mukerjee, 2017)

Algebraic Theory of q-ry Gray Coding. Encoding, Decoding, Some applications. See https://nivupai.github.io/GrayCoding.jl/dev/

Quantitative analysis of chemicals

Multi-language suite for analyzing calibration of probabilistic predictive models.

Generalized linear models for cell-cell communication

This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).

A package for discretizing trajectory data into a transition probability matrix using Ulam's method.

Gaussian Mixture Model Parameter Estimation

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Computes the boundary crossing probability for a general diffusion process and time-dependent boundary.

A collection of global matching models of recognition memory

This is a Julia package for implementing boid flocking simulations

Plots for ComputerAdaptiveTesting.jl and FittedItemBanks.jl

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Fast Inference of Biological Networks from Directed Regulations (Findr) in Julia

Deep Unfolded Convolutional Dictionary Learning for motif discovery.

A Julia version of ABBA with parallel k-means implementation

Real-time systems modeling and schedulability analysis

A Julia package for statistical modeling of binned data, e.g. histograms.

Plots.jl recipes for the GeoStats.jl framework