Computations on genome locations, inspired by BioConductor.

Binding for bwa

A lightweight Arabic NLP toolkit

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Easy-to-use biological sequence tools working with DNA, RNA and aminoacid sequences.

Julia interface to LinearFold RNA structure prediction programs: LinearFold, LinearPartition, LinearSampling, and LinearTurboFold

Variable Selection with Knockoffs

Method to estimate phylogenetic networks from algebraic invariants

Core utilities for PopGen.jl, including the PopData type and file IO

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Julia implementation of the ISOKANN algorithm for the computation of invariant subspaces of Koopman operators

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Process your biological records with ease

Estimation of coalescence times between sequences.

Codon Usage Bias in Julia

Analysis of Gaussian models on phylogenetic networks using belief propagation (aka message passing)

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Make simple requests to Ensembl BioMart database.

Julia implementation of the characteristic attribute organization system (CAOS) algorithm

Makie recpies for visualising KmerAnalysis types and results.

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Create population genetics simulations

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Molecular backbone geometry utilities

Simulate phenotypes from any GLM model

FASTX records with typed sequences and optional qualities.

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DemultiplexJulia package

Package for generation of Julia gene regulatory network models

Viral haplotype calling by linkage disequilibrium

A package holding constraint based model generation utility type functions and types

Standard data cleaning tools prior to generating BEAST xml file

Graphical interface for BiochemicalAlgorithms.jl