Dependency Packages
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FreqTables.jl88Frequency tables in Julia
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GenericTensorNetworks.jl87Generic tensor networks for solution space properties.
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Dynare.jl86A Julia rewrite of Dynare: solving, simulating and estimating DSGE models.
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Mill.jl86Build flexible hierarchical multi-instance learning models.
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RandomMatrices.jl85Random matrices package for Julia
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VariantVisualization.jl84Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:
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OrbitalTrajectories.jl83OrbitalTrajectories.jl is a modern orbital trajectory design, optimisation, and analysis library for Julia, providing methods and tools for designing spacecraft orbits and transfers via high-performance simulations of astrodynamical models.
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Sunny.jl80Spin dynamics and generalization to SU(N) coherent states
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MLJModels.jl80Home of the MLJ model registry and tools for model queries and mode code loading
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ClimaAtmos.jl79ClimaAtmos.jl is a library for building atmospheric circulation models that is designed from the outset to leverage data assimilation and machine learning tools. We welcome contributions!
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EasyModelAnalysis.jl79High level functions for analyzing the output of simulations
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ParameterizedFunctions.jl77A simple domain-specific language (DSL) for defining differential equations for use in scientific machine learning (SciML) and other applications
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SemanticModels.jl77A julia package for representing and manipulating model semantics
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Pathfinder.jl75Preheat your MCMC
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MIToS.jl74A Julia package to analyze protein sequences, structures, and evolutionary information
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IncrementalInference.jl72Clique recycling non-Gaussian (multi-modal) factor graph solver; also see Caesar.jl.
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OpenQuantumTools.jl72Julia toolkit for open quantum system simulation.
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AlgebraicPetri.jl72Build Petri net models compositionally
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ReactionMechanismSimulator.jl72The amazing Reaction Mechanism Simulator for simulating large chemical kinetic mechanisms
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IonSim.jl71A simple tool for simulating trapped ion systems
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TuringGLM.jl71Bayesian Generalized Linear models using `@formula` syntax.
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FlashWeave.jl71Inference of microbial interaction networks from large-scale heterogeneous abundance data
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QuantumCumulants.jl70Generalized mean-field equations in open quantum systems
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ODINN.jl68Global glacier model using Universal Differential Equations for climate-glacier interactions
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Turkie.jl68Turing + Makie = Turkie
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TaylorDiff.jl68Taylor-mode automatic differentiation for higher-order derivatives
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EcologicalNetworks.jl68Everything you've never dreamed about measuring on ecological networks.
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Mimi.jl66Integrated Assessment Modeling Framework
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WorldDynamics.jl65An open-source framework written in Julia for global integrated assessment models.
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DiffEqUncertainty.jl65Fast uncertainty quantification for scientific machine learning (SciML) and differential equations
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SciMLExpectations.jl65Fast uncertainty quantification for scientific machine learning (SciML) and differential equations
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PETLION.jl65High-performance simulations of the Porous Electrode Theory for Li-ion batteries
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AlgebraicDynamics.jl65Building dynamical systems compositionally
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ChemometricsTools.jl64A collection of tools for chemometrics and machine learning written in Julia.
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RoME.jl64Robot Motion Estimate: Tools, Variables, and Factors for SLAM in robotics; also see Caesar.jl.
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QuantumOpticsBase.jl64Base functionality library for QuantumOptics.jl
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StockFlow.jl63-
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Groebner.jl63Groebner bases in (almost) pure Julia
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MultiObjectiveAlgorithms.jl62A Julia package for solving multi-objective optimization problems
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CellMLToolkit.jl62CellMLToolkit.jl is a Julia library that connects CellML models to the Scientific Julia ecosystem.
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