Dependency Packages
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MolecularEvolution.jl11A Julia framework for developing phylogenetic models
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XSim.jl11Simulate sequence data and complicated pedigree structures
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SoleData.jl11Manage unstructured and multimodal datasets!
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Sisyphus.jl11A high-performance library for gradient based quantum optimal control
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BioLab.jl11⚪️
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Biomodelling.jl11Framework for stochastic modelling in systems biology
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ForecastPlots.jl11Collection of plot functionalities for time series analysis.
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ClassImbalance.jl11Sampling-based methods for correcting for class imbalance in two-category classification problems
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MultinomialRegression.jl11-
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SpiDy.jl11:spider: Non-Markovian stochastic SPIn (and harmonic oscillator) DYnamics.
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EnKF.jl11Develop tools for ensemble Kalman filter
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CircStats.jl11-
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BayesianTools.jl11Julia package designed to handle product distributions
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GasChromatographySimulator.jl11A package for the simulation of gas chromatography (GC)
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ModiaLang.jl11Deprecated package (use instead Modia.jl)
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KitML.jl11Lightweight module of neural differential equations in Kinetic.jl
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GradDescent.jl11Gradient Descent optimizers for Julia
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LWFBrook90.jl11Istope-enabled implementation of the LWF-BROOK90 hydrological model in Julia
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IsingModels.jl11-
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MEstimation.jl11Methods for M-estimation of statistical models
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NumericalMethodsforEngineers.jl11Programs modeled after "Numerical Methods for Engineers" by D.V. Griffiths and I.M. Smith
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MicroCanonicalHMC.jl11Implementation of Arxiv:2212.08549 in Julia
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ActionModels.jl11A Julia package for behavioural modeling
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AdaOPS.jl11An implementation of the AdaOPS (Adaptive Online Packing-based Search), which is an online POMDP Solver used to solve problems defined with the POMDPs.jl generative interface.
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PANDA.jl11Phylogenetic ANalyses of DiversificAtion (in Julia)
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LiteHF.jl11Light-weight HistFactory in pure Julia, attempts to be compatible with `pyhf` json format
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GeneralizedSasakiNakamura.jl11Computing solutions to the frequency-domain radial Teukolsky equation with the Generalized Sasaki-Nakamura (GSN) formalism in julia
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MLJText.jl11A an MLJ extension for accessing models and tools related to text analysis
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SimpleGraphAlgorithms.jl11Additional algorithms for the `SimpleGraphs` module that rely on integer programming
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ModalDecisionTrees.jl11Julia implementation of Modal Decision Trees & Forests, for interpretable classification of spatial and temporal data. Long live Symbolic Learning!!
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ExpressionTreeForge.jl10-
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LinearRegressionKit.jl10Linear Regression for Julia
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LocalApproximationValueIteration.jl10-
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Variography.jl10Variography for the GeoStats.jl framework
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TreeKnit.jl10TreeKnit is a package that infers Ancestral Reassortment Graphs for segmented genomes (typically, human influenza).
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TabularTDLearning.jl10Julia implementations of temporal difference Reinforcement Learning algorithms like Q-Learning and SARSA
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SwarmMakie.jl10Beeswarm plots for Makie.jl!
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Bezier.jl10A minimal implementation of bezier curves in julia
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AcousticsToolbox.jl10Julia wrapper for Acoustics Toolbox (Bellhop, Kraken, ...)
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CalciumScoring.jl10-
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