This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).

Reduced Basis Methods for Particle Systems

The gap between theory and practice is in practice greater than in theory.

Implementation of Guided Proposals (introduced by M Schauer, F van der Meulen, H van Zanten)

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A family of distributions that can serve as statistical models for unimodal distributions.

A package for the simulation of gas chromatography (GC) in complex systems

Simulations of epithelial dynamics in 1D.

Models of aerosol chemistry and physics using ModelingToolkit.jl

A Julia package for simulating the dynamics of passively crosslinked actin rings.

Valid Discrete-Time Methods for Relaxing pODEs

Automatically Differentiate the backward Euler method

Julia package dedicated to modeling and solving the change of reference frame problem for self-deforming bodies.

Model associated to Elife paper Rodrigues et al. 2023

Makie visualization module for TopOpt.jl

Boundary value problem interface for CalculustJL

Advanced exports management for AutomationLabs.jl

Subpackage of PowerDynamics.jl providing the functionality to solve/simulate the built models

Julia package for different types of asset return or price models

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Julia simulation package for TKTD models

Common galactic potential models as ModelingToolkit systems!

Build equations with informative errors for missing variables by explicitly assigning a process to each variable of the equations

Parameter estimation under uncertainty.

Trace estimation methods for matrix functions.

Self-concordant Smoothing for Large-Scale Convex Composite Optimization

Julia interface to BioMASS

Standard environments for benchmarking the performance of RL algorithms.

A Julia package to simulate and model interstellar scattering in strong regime.

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Reimplementation of a truncated multivariate distribution with fast, exact minimax-tilting based sampling.

Simple predictive models for tumor growth, and tools to apply them to clinical data

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Helper functions with ModelingToolkit

Fast 3D frame structural analysis

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This package is a part of RSim, however, may also be used as an independent package for the calculation of source terms from an xml mechanism input file

A package for the calculation of steady state coverages for a given gas composition, T and p

A simple package for MTK-based model testing