NextGP.jl

Next Generation Genomic Prediction Tools
Author datasciencetoolkit
Popularity
8 Stars
Updated Last
4 Months Ago
Started In
February 2022

NextGP: Next generation genomic prediction tools

  • NextGP project aims at providing necessary analysis tools to quantitative/statistical geneticists for genomic predictions.
  • As the name suggests, NextGP will focus on next generation of methods, though some traditional genomic prediction methods as well as conventional mixed model type of analysis will be a part of the package for completeness.
  • I will implement Bayesian approach in parameter estimations. In most cases, a Gibbs sampling procedure will be used.
  • NextGP has two main focus:
    • Models for multi-breed (population,line etc..) analysis
    • Gene regulatory network estimation
  • NextGP will rely on a set of Julia packages, some of which could be easily avoided, or will be avoided in the later releases.