Dependency Packages

Starlight.jl124A greedy game engine for greedy programmers!

BioMakie.jl36User interface tools for bioinformatics.

DocumenterTools.jl24Extra tools for setting up Documenter

MacroModelling.jl18Macros and functions to work with DSGE models.

ProjectionPursuit.jl15

SpeedMapping.jl13General fixed point mapping acceleration and optimization in Julia

DataAssimilationBenchmarks.jl13Package Information and Documentation

InteractBulma.jl9

SeqShuffle.jl9Shuffle the string sequences such that the kmer frequency is preserved in each string

InformationInequalities.jl8Information Theoretic Inequalities

SeisMain.jl7Main package for SeismicJulia project

ImgHdr.jl7Library to Check Type of Image

PhyNEST.jl7A Julia package for estimating phylogenetic networks from genomic data

SeisProcessing.jl7Processing tools for SeismicJulia project

SimpleBio.jl7Easytouse biological sequence tools working with DNA, RNA and aminoacid sequences.

DocThemeIndigo.jl6The Documenter Theme for the ChainRules family of packages. But you can use it too

GadgetIO.jl6Binary IO for the cosmological TreeSPH code Gadget

Retriever.jl5Julia wrapper for the Data Retriever software

SPHKernels.jl5Julia implementation of some common SPH kernels

PPLM.jl5A Julia based implementation of Plug and Play Language Models

MarkovChainHammer.jl5A toolkit for analyzing, generating, and constructing both continuous and discrete markov chains.

SPHtoGrid.jl5Package to map SPH particle data to a cartesian grid

EngThermBase.jl5Basic definitions for Engineering Thermodynamics in Julia

Nucleotide_Essentials.jl4

FastaLoader.jl4Load fasta files that contain DNA strings and process it for other downstream tasks

AgnosticBayesEnsemble.jl4This Package comprises a collection of ensemble algorithms for prediction, in order to improve the predictive performance for classification and regression problems.

CausalGPSLC.jl4Causal Inference using Gaussian Processes with Structured Latent Confounders. Estimate treatment effects with Gaussian processes.

SeisReconstruction.jl3Seismic reconstruction tools for SeismicJulia project

ThermofluidQuantities.jl3Basic tools and definitions of quantities in thermofluids problems

HiddenMarkovModelReaders.jl3Hidden Markov model and unsupervised hypothesis generator for signal processing and anomaly detection.

OhMyQSIM.jl3Yet another Quantum simulator

QuestDBClient.jl3QuestDB ILP Julia client.

GadgetUnits.jl3Unit conversion utility for the cosmological TreeSPH code Gadget

SimDNA.jl3Generate simulated DNA sequences for regulatory genomics problems

SeisPlot.jl2Plotting tools for SeismicJulia project

MotifPvalue.jl2Threshold and pvalue computations for Position Weight Matrices

DampRR.jl2A Julia package for the damped rank reduction method and its variants.

Gasdynamics1D.jl2Tools for analysis of 1d gasdynamics problems

IbnrClaims.jl2

UnfoldCDL.jl1Deep Unfolded Convolutional Dictionary Learning for motif discovery.
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