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Functions to run the SBML Test Suite with SBMLToolkit, create logs and create reports for the SBML Test Suite Database

Scalpels algorithm

An API for item response modelling in Julia

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Monotone Cubic B-Splines (arXiv:2307.01748)

Matrix Product Belief Propagation

MySQL adapter for SearchLight

StableSpectralElements.jl: Provably stable discontinuous spectral-element methods for conservation laws

A minimalist, platform-agnostic Julia package for univariate geophysical data.

Observable for Markov chain Monte Carlo simulations

A julia package for the simulation of stirred tank reactor with surface, gasphase or user defined chemistry models

Bayesian quantile regression in Julia

Power Spectral Density Probability Density Functions Calculation in Julia.

Code for our AISTATS '22 paper "Sampling in Dirichlet Process Mixture Models for Clustering Streaming Data"

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Epidemic spatial and temporal model setup and simulation. Focusing on state of the art epidemiology models such as universal differential equations, epidemiology-informed deep learning models. Part of Mathepia.jl

F-1 method

A comprehensive QTL analysis tool by multivariate linear mixed model.

Seismic reconstruction tools for SeismicJulia project

Defines the minimal interface for Comrade so people can add their own models

Julia package for numerical sensitivity analysis.

Julia-language port of the Sequencer algorithm, originally developed in python (https://github.com/dalya/Sequencer). The Sequencer finds trends in 1-dimensional data sets and has been used by its original authors for data analysis in astrophysics, seismology, image processing, etc. Contributions are welcome!

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Makes pixels from strings in a very basic way

Generate simulated DNA sequences for regulatory genomics problems

Magnon-phonon hybridized system.

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Simulation engine for Heta-based models

Convenience interfaces to Triangulate.jl and TetGen.jl

Utility Julia package for loading and saving LDPC codes to files

Higher order kernels for density and distribution estimation

Advanced process control for AutomationLabs

Julia wrapper of LoopTools for computing one-loop integrals

Analysis of Gaussian models on phylogenetic networks using belief propagation (aka message passing)

Dynamical systems identification

Load useful metadata from FlowJo workspace files such as gating strategies and sample groups

Defines distance_profile and utilities

A Julia package containing GNC algorithms for autonomous aerospace systems

A JuMP extension for conducting flexibility analysis.