Dependency Packages
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TensorFlow.jl866A Julia wrapper for TensorFlow
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DSGE.jl798Solve and estimate Dynamic Stochastic General Equilibrium models (including the New York Fed DSGE)
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FastAI.jl557Repository of best practices for deep learning in Julia, inspired by fastai
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GeometricFlux.jl330Geometric Deep Learning for Flux
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Molly.jl281Molecular simulation in Julia
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MAT.jl259Julia module for reading MATLAB files
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Bio.jl258[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
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ADCME.jl250Automatic Differentiation Library for Computational and Mathematical Engineering
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MLDatasets.jl204Utility package for accessing common Machine Learning datasets in Julia
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ProtoBuf.jl184Julia protobuf implementation
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NeuralOperators.jl151DeepONets, (Fourier) Neural Operators, Physics-Informed Neural Operators, and more in Julia
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SeaPearl.jl141Julia hybrid constraint programming solver enhanced by a reinforcement learning driven search.
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PProf.jl130Export Julia profiles to the pprof format
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ONNX.jl122Read ONNX graphs in Julia
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OpenStreetMapX.jl105OpenStreetMap (*.osm) support for Julia 1.0 and up
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MIPVerify.jl104Evaluating Robustness of Neural Networks with Mixed Integer Programming
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FluxTraining.jl95A flexible neural net training library inspired by fast.ai
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TensorBoardLogger.jl88Easy peasy logging to TensorBoard with Julia
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CounterfactualExplanations.jl75A package for Counterfactual Explanations and Algorithmic Recourse in Julia.
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BioStructures.jl72A Julia package to read, write and manipulate macromolecular structures (particularly proteins)
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MatrixDepot.jl70An Extensible Test Matrix Collection for Julia
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JDF.jl69Julia DataFrames serialization format
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VariantVisualization.jl69Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:
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AdFem.jl67Innovative, efficient, and computational-graph-based finite element simulator for inverse modeling
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DeepQLearning.jl65Implementation of the Deep Q-learning algorithm to solve MDPs
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FundamentalsNumericalComputation.jl60Core functions for the Julia (2nd) edition of the text Fundamentals of Numerical Computation, by Driscoll and Braun.
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GeneticsMakie.jl57🧬High-performance genetics-related data visualization using Makie.jl
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COBRA.jl53High-level, high-performance, constraint-based reconstruction and analysis in Julia
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ADSeismic.jl52A General Approach to Seismic Inversion Problems using Automatic Differentiation
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TypeDBClient.jl51A client interface to read from and write to the TypeDB Knowledge Graph
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Elly.jl44Hadoop HDFS and Yarn client
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MRIsim.jl43Koma is a framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.
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KomaMRI.jl43Koma is a framework to efficiently simulate Magnetic Resonance Imaging (MRI) acquisitions. The main focus of this package is to simulate general scenarios that could arise in pulse sequence development.
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Neuroimaging.jl42Neuroimaging in Julia
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SnpArrays.jl40Compressed storage for SNP data
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PopGen.jl37Population Genetics in Julia
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BioMakie.jl36User interface tools for bioinformatics.
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FwiFlow.jl35Elastic Full Waveform Inversion for Subsurface Flow Problems Using Intrusive Automatic Differentiation
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RealNeuralNetworks.jl35A unified framework for skeletonization, morphological analysis, and connectivity analysis.
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AIBECS.jl34The ideal tool for exploring global marine biogeochemical cycles.
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