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A lightweight julia package providing basic implementations of item response models

Automatically Differentiate the backward Euler method

Generalized linear models for cell-cell communication

This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).

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Reduced Basis Methods for Particle Systems

Advanced exports management for AutomationLabs.jl

Boundary value problem interface for CalculustJL

Largrange polynomial based spectral PDE solvers

Python extensions relating to Caesar.jl

A Julia package for inverting Taylor series

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NLPModel for evaluating the objective and constraint in one step.

Self-concordant Smoothing for Large-Scale Convex Composite Optimization

Helper functions with ModelingToolkit

Julia simulation package for TKTD models

Time-domain solver for the electromagnetic fields produced by arbitrary (electric and magnetic) charges and currents.

Implementation of the finite volume method for moving boundary problems in 1D.

Ipopt wrapper for Nonconvex.jl.

Trace estimation methods for matrix functions.

Algorithms for the transport of mass and energy in the environment

Constrained Bayesian optimization implementation in Nonconvex.jl

A framework for simulating dynamical structures coupling with viscous incompressible flows

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Common galactic potential models as ModelingToolkit systems!

Reimplementation of a truncated multivariate distribution with fast, exact minimax-tilting based sampling.

Simple predictive models for tumor growth, and tools to apply them to clinical data

InvariantMeasures

A simple package for MTK-based model testing

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Pavito wrapper in Nonconvex.jl

Generalized Nernst-Planck-Poisson model for liquid electrolytes

Standard environments for benchmarking the performance of RL algorithms.

Parameter estimation under uncertainty.

A package for the calculation of steady state coverages for a given gas composition, T and p

This package is a part of RSim, however, may also be used as an independent package for the calculation of source terms from an xml mechanism input file

Build equations with informative errors for missing variables by explicitly assigning a process to each variable of the equations