Finite State Projection algorithms for chemical reaction networks

Physics-Enhanced Regression for Initial Value Problems

Tools for working with color schemes, color maps, gradients

The Yao compiler project

Julia package for multicellular modeling

MeshGraphNets.jl is a software package for the Julia programming language that provides an implementation of the MeshGraphNets framework by Google DeepMind for simulating mesh-based physical systems via graph neural networks.

An optimization library for the operation and restoration of electric power distribution feeders featuring networked microgrids

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Simulating Rydberg atom dynamics with Tensor Networks

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FMIImport.jl implements the import functionalities of the FMI-standard (fmi-standard.org) for the Julia programming language. FMIImport.jl provides the foundation for the Julia packages FMI.jl and FMIFlux.jl.

Bayesian inference on wiring diagrams.

Julia package for finding robust shortest paths

Julia bindings to SG-t-SNE-Π

A simulator for ecological dynamics written in Julia.

From Semiconductor to TransistorLevel Modeling in Julia

Package for approximation of solutions to matrix differential equations or time-dependent matrices via dynamically evolving low rank decomposition.

Reduced-space optimization, for optimal power flow.

Simulators for kite power systems

A computational graph for time-series processing.

Relational piecewise-linear overapproximations of multi-dimensional functions

A Julia package that implements a category of reaction (transportation) network-type dynamical systems.

Diffusion MRI Simulation Toolbox in Julia

Working efficiently with datasets where observations have associated uncertainties.

Julia wrapper for the Spot LTL and automata manipulation library

Tools for chemometrics and machine learning on high-dimensional data (e.g. Partial least squares regression/discrimination)

Integrating Neural Ordinary Differential Equations, the Method of Lines, and Graph Neural Networks

A find-and-replace tool for crystal structure models. implements (i) subgraph matching and (ii) point set alignment to search a parent crystal for a query fragment, then align and install a replacement fragment in its place.

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A LightGraphs.jl compatible graph package for graphs with multiple vertex, edge and graph metadata.

Some convenient hacks when using Nonconvex.jl.

A pure Julia implementation of the Targeted Minimum Loss-based Estimation

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Matching algorithms for Graphs.jl

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An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia

Finite-element toolbox in Julia

Reduce several arbitrary-connectivity optimization problems into maximum independent set problems on a grid

Import dynamic models in the SBML format into a ReactionSystem for Gillespie, SDE and ODE simulations

Package to analyse VIIRS nighttime lights