🎲 Parameter estimation for Oceananigans using EnsembleKalmanProcesses

Deprecated package (use instead Modia.jl)

Population and community dynamics on spatial graphs, in julia. (formerly EcoDynamics.jl)

A Julia implementation of PRONTO

A package to calibrate atmospheric turbulence and convection parameterizations using gradient-free ensemble Kalman methods

MDToolbox.jl: A Julia package for molecular dynamics trajectories analysis and modeling of biomolecules

A Julia framework for implementing branch-and-bound-type algorithms

Common interface bindings for the MATLAB ODE solvers via MATLAB.jl for the SciML Scientific Machine Learning ecosystem

A general purpose numerical simulator supporting nested dynamical systems and a convenient macro-based data logger.

Open-source Julia tool for transmission and distribution expansion planning considering storage and demand flexibility

Finite State Projection algorithms for chemical reaction networks

Physics-Enhanced Regression for Initial Value Problems

A NLPModel API for optimization problems with PDE-constraints

A Julia package for reading the Brazilian electric power system file ".pwf".

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Computational material models

General Relativistic Orbital Dynamics in Julia

FMIImport.jl implements the import functionalities of the FMI-standard (fmi-standard.org) for the Julia programming language. FMIImport.jl provides the foundation for the Julia packages FMI.jl and FMIFlux.jl.

An optimization library for the operation and restoration of electric power distribution feeders featuring networked microgrids

A package to calculate ensemble averaged waves in heterogeneous materials. The focus is on wave propagation, scattering, and reflection, from particulate and porous materials.

A simulator for ecological dynamics written in Julia.

Transition Indicators / Early Warning Signals / Regime Shifts / Change Point Detection

Julia package for multicellular modeling

Methods for profile likelihood analysis.

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From Semiconductor to TransistorLevel Modeling in Julia

MeshGraphNets.jl is a software package for the Julia programming language that provides an implementation of the MeshGraphNets framework by Google DeepMind for simulating mesh-based physical systems via graph neural networks.

Relational piecewise-linear overapproximations of multi-dimensional functions

Source code for https://nature.com/articles/s41467-019-10933-3

A Julia package that implements a category of reaction (transportation) network-type dynamical systems.

Simulators for kite power systems

Scalable nonparametric clustering with unified marker gene selection for single-cell RNA-seq data

Design scalable noise characterisation experiments for quantum computers

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Reduced-space optimization, for optimal power flow.

Diffusion MRI Simulation Toolbox in Julia

Analysis of Single Cell Expression data in Julia

Low Inertia Transient Simulation Toolbox for Power Systems

Tools for chemometrics and machine learning on high-dimensional data (e.g. Partial least squares regression/discrimination)

Integrating Neural Ordinary Differential Equations, the Method of Lines, and Graph Neural Networks