Dependency Packages
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SpiDy.jl11:spider: Non-Markovian stochastic SPIn (and harmonic oscillator) DYnamics.
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RNAForecaster.jl8-
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ShipMMG.jl8Ship maneuvering simulation tool with respect to ShipMMG model
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NumCME.jl8Direct solution of the Chemical Master Equation in Julia.
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RealTimeAudioDiffEq.jl7A Julia package for real-time audification of ODEs and SDEs
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FindSteadyStates.jl6Https://stevengogogo.github.io/FindSteadyStates.jl/dev
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VlasovMethods.jl6Numerical Methods for Vlasov-Poisson and Vlasov-Maxwell Systems
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DeepCompartmentModels.jl6Package for fitting models according to the deep compartment modeling framework for pharmacometric applications.
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SubspaceInference.jl5Subspace Inference package for uncertainty analysis in deep neural networks and neural ordinary differential equations using Julia
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AutomationLabs.jl5A powerful, no code solution for control and systems engineering
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Population.jl5A dynamically-structured matrix population model
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AutomationLabsIdentification.jl4Dynamical systems identification
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StirredReactor.jl4A julia package for the simulation of stirred tank reactor with surface, gasphase or user defined chemistry models
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BSTModelKit.jl4A Julia package for building, and running Biochemical Systems Theory (BST) models
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Collide.jl4-
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QuantumAnnealingAnalytics.jl4Tools for Visualization of Quantum Annealing
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MathepiaModels.jl4Epidemic spatial and temporal model setup and simulation. Focusing on state of the art epidemiology models such as universal differential equations, epidemiology-informed deep learning models. Part of Mathepia.jl
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Chamber.jl3-
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VoronoiFVMDiffEq.jl3-
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NetworkJumpProcesses.jl3Julia package to facilitate the construction of JumpProblems on graphs.
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Kinbiont.jl2Ecosystem of numerical methods for microbial kinetics data analysis, from preprocessing to result interpretation.
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BOMBs.jl2Repository for the Julia BOMBS package
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BatchReactor.jl2A package for simulating batch reactor model with gasphase chemistry, surface chemistry or user defined chemistry
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AtmosphericDeposition.jl2Models of atmospheric deposition using ModelingToolkit.jl
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PlugFlowReactor.jl2-
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EarthSciData.jl2-
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Superfluids.jl2Gross-Pitaevskii and Bogoliubov-de Gennes in 2D
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ContinuousTimePolicyGradients.jl2A package for the development and implementation of continuous-time policy gradient (CTPG) methods.
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AstroChemistry.jl2-
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Vensim2MTK.jl2A Julia package to import Vensim .xmile files as ModelingToolkit.jl models.
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DifferentiableBackwardEuler.jl1Automatically Differentiate the backward Euler method
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PhysiologyModeling.jl1-
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Aerosol.jl1Models of aerosol chemistry and physics using ModelingToolkit.jl
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ActinFriction.jl1A Julia package for simulating the dynamics of passively crosslinked actin rings.
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SynapseElife.jl1Model associated to Elife paper Rodrigues et al. 2023
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GasChromatographySystems.jl1A package for the simulation of gas chromatography (GC) in complex systems
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NestedEnvironments.jl1-
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ReactionNetworkEvolution.jl1This package simplifies evolutionary algorithms for applications in systems biology. It can be used to generate oscillating reaction networks, networks that match input timeseries data, or fit parameters (rateconstants).
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ReducedBasisMethods.jl1Reduced Basis Methods for Particle Systems
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PooksoftAssetModelingKit.jl1Julia package for different types of asset return or price models
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