Dependency Packages
-
Javis.jl827Julia Animations and Visualizations
-
Luxor.jl586Simple drawings using vector graphics; Cairo "for tourists!"
-
Bio.jl261[DEPRECATED] Bioinformatics and Computational Biology Infrastructure for Julia
-
PhyloNetworks.jl155A Julia package for statistical inference, data manipulation and visualization of phylogenetic networks
-
MakiePublication.jl111A Julia package for producing publication quality figures based on Makie.jl.
-
WordCloud.jl107Word cloud generator in julia
-
MathTeXEngine.jl97A latex math mode engine in pure Julia.
-
GenericTensorNetworks.jl87Generic tensor networks for solution space properties.
-
VariantVisualization.jl84Julia package powering VIVA, our tool for visualization of genomic variation data. Manual:
-
GeneticsMakie.jl77🧬High-performance genetics- and genomics-related data visualization using Makie.jl
-
Karnak.jl69Graph plotting and drawing networks with Julia, using Luxor graphics
-
GenomeGraphs.jl67A modern genomics framework for julia
-
FASTX.jl61Parse and process FASTA and FASTQ formatted files of biological sequences.
-
BioMakie.jl56Plotting and interface tools for biology.
-
PopGen.jl46Population Genetics in Julia
-
SnpArrays.jl44Compressed storage for SNP data
-
OpticSim.jl44-
-
Vizagrams.jl42Integrating diagramming and data visualization
-
GeneticVariation.jl40Datastructures and algorithms for working with genetic variation
-
Lindenmayer.jl37Draw Lindenmayer (L-Systems) recursive graphics
-
Thebes.jl31Thebes.jl is a simple little package that provides 3D services to Luxor.jl.
-
Octofitter.jl29Octofitter is a Julia package for performing Bayesian inference against direct images of exoplanets, relative astrometry, and astrometric acceleration of the host star.
-
BioCore.jl28Core types and interfaces for BioJulia packages
-
XAM.jl27Parse and process SAM and BAM formatted files
-
TensorQEC.jl27Tensor networks for quantum error correction.
-
BosonSampling.jl26Boson sampling tools for Julia
-
ElasticSurfaceEmbedding.jl25The weaving paper strips: shape optimization by geometric elasticity
-
MendelImpute.jl24OpenMendel package for haplotyping and imputation
-
MendelIHT.jl22Iterative hard thresholding for l0 penalized regression
-
OrdinalGWAS.jl21Genome-wide association studies (GWAS) for ordered categorical phenotypes
-
Mellan.jl19Spiral engraving effect
-
TensorInference.jl19Probabilistic inference using contraction of tensor networks
-
VCFTools.jl18Julia utilities for handling VCF files
-
PhyloPlots.jl16Display utilities for phylogenetic trees and networks
-
UnitDiskMapping.jl16Reduce several arbitrary-connectivity optimization problems into maximum independent set problems on a grid
-
SExpressions.jl15Assorted s-expression utilities for Julia
-
GenomicMaps.jl15Julia package for visualising genomic data
-
BioTools.jl14Interfaces to common external biological tools from julia scripts and programs
-
PhyloCoalSimulations.jl13-
-
EasyABM.jl13An easy to use Julia framework for agent based modeling.
Loading more...